Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.7■□□□□ 0.26
AP3B1O00203 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.7■□□□□ 0.26
AP3B1O00203 KRT126P-201ENST00000549467 1181 ntBASIC16.7■□□□□ 0.26
AP3B1O00203 AC096734.2-201ENST00000562054 433 ntBASIC16.7■□□□□ 0.26
AP3B1O00203 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.7■□□□□ 0.26
AP3B1O00203 MIR7706-201ENST00000613747 67 ntBASIC16.7■□□□□ 0.26
AP3B1O00203 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.7■□□□□ 0.26
AP3B1O00203 AC116407.3-201ENST00000623905 1129 ntBASIC16.7■□□□□ 0.26
AP3B1O00203 AC007064.4-201ENST00000637740 555 ntBASIC16.7■□□□□ 0.26
AP3B1O00203 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
AP3B1O00203 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
AP3B1O00203 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
AP3B1O00203 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AP3B1O00203 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.7■□□□□ 0.26
AP3B1O00203 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3B1O00203 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3B1O00203 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.69■□□□□ 0.26
AP3B1O00203 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
AP3B1O00203 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
AP3B1O00203 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3B1O00203 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.69■□□□□ 0.26
AP3B1O00203 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
AP3B1O00203 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3B1O00203 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3B1O00203 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
AP3B1O00203 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3B1O00203 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3B1O00203 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
AP3B1O00203 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
AP3B1O00203 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3B1O00203 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3B1O00203 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
AP3B1O00203 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.69■□□□□ 0.26
AP3B1O00203 TPM4P1-201ENST00000436100 807 ntBASIC16.69■□□□□ 0.26
AP3B1O00203 AC009947.1-201ENST00000444350 727 ntBASIC16.69■□□□□ 0.26
AP3B1O00203 AC079776.4-201ENST00000511039 504 ntBASIC16.69■□□□□ 0.26
AP3B1O00203 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
AP3B1O00203 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.69■□□□□ 0.26
AP3B1O00203 AC109635.5-201ENST00000533593 962 ntBASIC16.69■□□□□ 0.26
AP3B1O00203 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.69■□□□□ 0.26
AP3B1O00203 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.69■□□□□ 0.26
AP3B1O00203 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
AP3B1O00203 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3B1O00203 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3B1O00203 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3B1O00203 AL592424.1-201ENST00000563624 1536 ntBASIC16.69■□□□□ 0.26
AP3B1O00203 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3B1O00203 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3B1O00203 AC068418.2-201ENST00000577309 3703 ntBASIC16.69■□□□□ 0.26
AP3B1O00203 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3B1O00203 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
AP3B1O00203 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
AP3B1O00203 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
AP3B1O00203 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
AP3B1O00203 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3B1O00203 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3B1O00203 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP3B1O00203 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3B1O00203 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP3B1O00203 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
AP3B1O00203 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.68■□□□□ 0.26
AP3B1O00203 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3B1O00203 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3B1O00203 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3B1O00203 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP3B1O00203 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.68■□□□□ 0.26
AP3B1O00203 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3B1O00203 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.68■□□□□ 0.26
AP3B1O00203 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3B1O00203 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3B1O00203 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3B1O00203 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3B1O00203 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
AP3B1O00203 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.68■□□□□ 0.26
AP3B1O00203 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
AP3B1O00203 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3B1O00203 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
AP3B1O00203 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3B1O00203 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
AP3B1O00203 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3B1O00203 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3B1O00203 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3B1O00203 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP3B1O00203 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
AP3B1O00203 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.68■□□□□ 0.26
AP3B1O00203 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3B1O00203 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.68■□□□□ 0.26
AP3B1O00203 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3B1O00203 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
AP3B1O00203 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.68■□□□□ 0.26
AP3B1O00203 PCDHA1-201ENST00000378133 2726 ntBASIC16.68■□□□□ 0.26
AP3B1O00203 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
AP3B1O00203 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.68■□□□□ 0.26
AP3B1O00203 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms