Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.65□□□□□ -0.38
COLCA2A8K830 APTR-203ENST00000430801 583 ntTSL 5 BASIC12.65□□□□□ -0.38
COLCA2A8K830 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COLCA2A8K830 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.65□□□□□ -0.38
COLCA2A8K830 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC12.65□□□□□ -0.38
COLCA2A8K830 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC12.65□□□□□ -0.38
COLCA2A8K830 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COLCA2A8K830 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
COLCA2A8K830 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COLCA2A8K830 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
COLCA2A8K830 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC12.65□□□□□ -0.38
COLCA2A8K830 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
COLCA2A8K830 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COLCA2A8K830 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
COLCA2A8K830 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COLCA2A8K830 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.65□□□□□ -0.38
COLCA2A8K830 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
COLCA2A8K830 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.65□□□□□ -0.38
COLCA2A8K830 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COLCA2A8K830 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COLCA2A8K830 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
COLCA2A8K830 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.65□□□□□ -0.38
COLCA2A8K830 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COLCA2A8K830 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
COLCA2A8K830 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
COLCA2A8K830 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
COLCA2A8K830 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
COLCA2A8K830 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
COLCA2A8K830 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.65□□□□□ -0.39
COLCA2A8K830 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
COLCA2A8K830 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.64□□□□□ -0.39
COLCA2A8K830 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
COLCA2A8K830 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.64□□□□□ -0.39
COLCA2A8K830 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.64□□□□□ -0.39
COLCA2A8K830 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.64□□□□□ -0.39
COLCA2A8K830 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.64□□□□□ -0.39
COLCA2A8K830 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.64□□□□□ -0.39
COLCA2A8K830 MYO15B-237ENST00000642007 4893 ntBASIC12.64□□□□□ -0.39
COLCA2A8K830 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC12.64□□□□□ -0.39
COLCA2A8K830 AC004980.1-204ENST00000429707 299 ntBASIC12.64□□□□□ -0.39
COLCA2A8K830 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.64□□□□□ -0.39
COLCA2A8K830 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC12.64□□□□□ -0.39
COLCA2A8K830 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC12.64□□□□□ -0.39
COLCA2A8K830 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 AC104390.1-201ENST00000555663 520 ntBASIC12.64□□□□□ -0.39
COLCA2A8K830 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC12.64□□□□□ -0.39
COLCA2A8K830 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
COLCA2A8K830 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC12.64□□□□□ -0.39
COLCA2A8K830 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC12.64□□□□□ -0.39
COLCA2A8K830 Six3os1_6.1-201ENST00000620790 196 ntBASIC12.64□□□□□ -0.39
COLCA2A8K830 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.64□□□□□ -0.39
COLCA2A8K830 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.64□□□□□ -0.39
COLCA2A8K830 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 AC083964.2-201ENST00000623988 2396 ntBASIC12.64□□□□□ -0.39
COLCA2A8K830 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.64□□□□□ -0.39
COLCA2A8K830 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
COLCA2A8K830 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
COLCA2A8K830 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COLCA2A8K830 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COLCA2A8K830 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COLCA2A8K830 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COLCA2A8K830 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
COLCA2A8K830 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
COLCA2A8K830 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COLCA2A8K830 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COLCA2A8K830 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.63□□□□□ -0.39
COLCA2A8K830 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COLCA2A8K830 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COLCA2A8K830 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COLCA2A8K830 AC004951.3-201ENST00000418645 1148 ntBASIC12.63□□□□□ -0.39
COLCA2A8K830 SPI1-203ENST00000533030 661 ntTSL 2 BASIC12.63□□□□□ -0.39
COLCA2A8K830 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
COLCA2A8K830 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC12.63□□□□□ -0.39
COLCA2A8K830 AC004264.1-201ENST00000608354 794 ntBASIC12.63□□□□□ -0.39
COLCA2A8K830 AC124016.1-201ENST00000609552 612 ntBASIC12.63□□□□□ -0.39
COLCA2A8K830 AC092118.2-201ENST00000613495 667 ntBASIC12.63□□□□□ -0.39
COLCA2A8K830 AL445675.2-201ENST00000620291 557 ntBASIC12.63□□□□□ -0.39
COLCA2A8K830 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC12.63□□□□□ -0.39
COLCA2A8K830 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
COLCA2A8K830 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
COLCA2A8K830 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms