Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RCCD1A6NED2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCCD1A6NED2 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RCCD1A6NED2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.55■□□□□ 0.4
RCCD1A6NED2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCCD1A6NED2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RCCD1A6NED2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RCCD1A6NED2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.54■□□□□ 0.4
RCCD1A6NED2 AP002414.2-201ENST00000591780 3365 ntBASIC17.54■□□□□ 0.4
RCCD1A6NED2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCCD1A6NED2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RCCD1A6NED2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.54■□□□□ 0.4
RCCD1A6NED2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCCD1A6NED2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCCD1A6NED2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
RCCD1A6NED2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCCD1A6NED2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCCD1A6NED2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.54■□□□□ 0.4
RCCD1A6NED2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RCCD1A6NED2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.54■□□□□ 0.4
RCCD1A6NED2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.54■□□□□ 0.4
RCCD1A6NED2 AC005412.3-201ENST00000580309 715 ntBASIC17.54■□□□□ 0.4
RCCD1A6NED2 AC091076.1-201ENST00000610741 619 ntBASIC17.54■□□□□ 0.4
RCCD1A6NED2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
RCCD1A6NED2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.54■□□□□ 0.4
RCCD1A6NED2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.54■□□□□ 0.4
RCCD1A6NED2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RCCD1A6NED2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RCCD1A6NED2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCCD1A6NED2 AC136621.1-201ENST00000624017 2304 ntBASIC17.54■□□□□ 0.4
RCCD1A6NED2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
RCCD1A6NED2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.54■□□□□ 0.4
RCCD1A6NED2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCCD1A6NED2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCCD1A6NED2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RCCD1A6NED2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.54■□□□□ 0.4
RCCD1A6NED2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.54■□□□□ 0.4
RCCD1A6NED2 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RCCD1A6NED2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
RCCD1A6NED2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.53■□□□□ 0.4
RCCD1A6NED2 AC008677.1-201ENST00000519230 1561 ntBASIC17.53■□□□□ 0.4
RCCD1A6NED2 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCCD1A6NED2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.53■□□□□ 0.4
RCCD1A6NED2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCCD1A6NED2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RCCD1A6NED2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RCCD1A6NED2 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCCD1A6NED2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.53■□□□□ 0.4
RCCD1A6NED2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCCD1A6NED2 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCCD1A6NED2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RCCD1A6NED2 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RCCD1A6NED2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCCD1A6NED2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCCD1A6NED2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCCD1A6NED2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RCCD1A6NED2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RCCD1A6NED2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RCCD1A6NED2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCCD1A6NED2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
RCCD1A6NED2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.53■□□□□ 0.4
RCCD1A6NED2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.53■□□□□ 0.4
RCCD1A6NED2 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.53■□□□□ 0.4
RCCD1A6NED2 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RCCD1A6NED2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCCD1A6NED2 REXO1L6P-202ENST00000619970 1078 ntBASIC17.53■□□□□ 0.4
RCCD1A6NED2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCCD1A6NED2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCCD1A6NED2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.53■□□□□ 0.4
RCCD1A6NED2 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.53■□□□□ 0.4
RCCD1A6NED2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RCCD1A6NED2 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.53■□□□□ 0.4
RCCD1A6NED2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.53■□□□□ 0.4
RCCD1A6NED2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.53■□□□□ 0.4
RCCD1A6NED2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RCCD1A6NED2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.53■□□□□ 0.4
RCCD1A6NED2 SSR4P1-203ENST00000599569 2260 ntBASIC17.52■□□□□ 0.4
RCCD1A6NED2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RCCD1A6NED2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
RCCD1A6NED2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RCCD1A6NED2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RCCD1A6NED2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RCCD1A6NED2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RCCD1A6NED2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.52■□□□□ 0.4
RCCD1A6NED2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.52■□□□□ 0.4
RCCD1A6NED2 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RCCD1A6NED2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RCCD1A6NED2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RCCD1A6NED2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RCCD1A6NED2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RCCD1A6NED2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RCCD1A6NED2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms