Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 LINC02199-201ENST00000506655 2702 ntBASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 FAM58CP-201ENST00000435741 640 ntBASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AP006288.1-201ENST00000446065 395 ntBASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 HLA-J-202ENST00000469281 1241 ntBASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AC129492.6-201ENST00000611383 1305 ntBASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 AC022188.1-201ENST00000620960 1664 ntBASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRBV4S1A1TA0A5B7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms