Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC020765.3-201ENST00000613051 740 ntBASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TCRBV3S1A0A5B6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TCRBV3S1A0A5B6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
TCRBV3S1A0A5B6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TCRBV3S1A0A5B6 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TCRBV3S1A0A5B6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.46■□□□□ 0.06
TCRBV3S1A0A5B6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TCRBV3S1A0A5B6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TCRBV3S1A0A5B6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.46■□□□□ 0.06
TCRBV3S1A0A5B6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TCRBV3S1A0A5B6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 AC007292.2-201ENST00000593524 1812 ntBASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 TERF1P1-201ENST00000311003 1181 ntBASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 AC113347.1-201ENST00000413321 391 ntBASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 AC011498.5-201ENST00000592027 486 ntBASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 TMEM191A-211ENST00000637163 1067 ntBASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 AC106881.1-201ENST00000605849 3329 ntBASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TCRBV3S1A0A5B6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 AC087481.3-201ENST00000602886 1894 ntBASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 LINC01101-201ENST00000622953 1884 ntBASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 AC079776.2-201ENST00000641154 1609 ntBASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 RCN1P2-201ENST00000398357 915 ntBASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 AC087499.1-201ENST00000418141 1075 ntBASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 AC010331.1-201ENST00000611423 582 ntBASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TCRBV3S1A0A5B6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms