Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.43■□□□□ 0.06
TRBV5-3A0A0A0MS03 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 HNRNPDP1-201ENST00000439535 754 ntBASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 AC018712.1-201ENST00000455767 687 ntBASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 AC105339.3-201ENST00000560043 636 ntBASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 AC012640.2-201ENST00000561606 901 ntBASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 PRELID1P1-202ENST00000567272 903 ntBASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 OR6D1P-203ENST00000641209 4860 ntBASIC15.42■□□□□ 0.06
TRBV5-3A0A0A0MS03 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 AP002414.3-201ENST00000589352 1468 ntBASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 SSR4P1-203ENST00000599569 2260 ntBASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 RNPS1P1-201ENST00000507437 918 ntBASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 CLEC4GP1-201ENST00000596555 870 ntBASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 MIR1199-201ENST00000621445 119 ntBASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 AC004790.2-201ENST00000623588 572 ntBASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 TP73-AS1-207ENST00000624167 988 ntBASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 AC020658.6-201ENST00000623564 1870 ntBASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRBV5-3A0A0A0MS03 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV5-3A0A0A0MS03 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms