Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 AC073439.1-201ENST00000624121 1774 ntBASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 AP002490.2-201ENST00000524791 560 ntBASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 AC009118.2-201ENST00000613275 655 ntBASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 AL139011.1-202ENST00000642063 584 ntBASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CSNK1G3Q9Y6M4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 NKILA-202ENST00000614771 2598 ntBASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 TSSK5P-201ENST00000423978 907 ntBASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 AC011676.5-201ENST00000624864 2660 ntBASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 AC063926.2-201ENST00000623766 1308 ntBASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.13■□□□□ 0.17
CSNK1G3Q9Y6M4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 AL138828.2-201ENST00000615812 383 ntBASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 SPDYE12P-201ENST00000618416 771 ntBASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSNK1G3Q9Y6M4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.11■□□□□ 0.17
CSNK1G3Q9Y6M4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms