Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 HIST3H2BA-201ENST00000436555 524 ntBASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 AP002490.2-201ENST00000524791 560 ntBASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 AL583810.1-201ENST00000553344 1045 ntBASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 RN7SL219P-201ENST00000582872 296 ntBASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTCBQ9Y3I0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 NME6-203ENST00000415644 849 ntTSL 2 BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 RN7SL399P-201ENST00000471648 279 ntBASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 SLC25A47P1-201ENST00000531577 414 ntBASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 MIR6787-201ENST00000616675 61 ntBASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 GPR182-203ENST00000622922 591 ntBASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTCBQ9Y3I0 AL031731.1-201ENST00000642131 2094 ntBASIC20.58■□□□□ 0.88
RTCBQ9Y3I0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
RTCBQ9Y3I0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTCBQ9Y3I0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
RTCBQ9Y3I0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.58■□□□□ 0.88
RTCBQ9Y3I0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTCBQ9Y3I0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTCBQ9Y3I0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.58■□□□□ 0.88
RTCBQ9Y3I0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 MIR1908-201ENST00000410394 80 ntBASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 CTBP2P5-201ENST00000454986 1264 ntBASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 PDIA3P1-201ENST00000471856 1510 ntBASIC20.57■□□□□ 0.88
RTCBQ9Y3I0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 AC093525.8-201ENST00000624099 1342 ntBASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 LBX2-201ENST00000341396 886 ntTSL 3 BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 KLF2P4-201ENST00000451959 1225 ntBASIC20.56■□□□□ 0.88
RTCBQ9Y3I0 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms