Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDHA4Q9UN74 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PCDHA4Q9UN74 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 U82695.1-201ENST00000635752 1889 ntBASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 FOXO1B-201ENST00000504678 1527 ntBASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 AL592424.1-201ENST00000563624 1536 ntBASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 PCDH8P1-201ENST00000428983 2773 ntBASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHA4Q9UN74 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 MIR346-201ENST00000362234 95 ntBASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 AL592309.1-201ENST00000443127 649 ntBASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 AC069335.1-201ENST00000489972 472 ntBASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 KRT8P23-201ENST00000560090 1207 ntBASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 MTHFR-217ENST00000641820 1569 ntBASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDHA4Q9UN74 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 MIR1233-2-201ENST00000408138 82 ntBASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 MIR1233-1-201ENST00000408722 82 ntBASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 AC004461.1-201ENST00000412461 403 ntBASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 AC142381.1-201ENST00000426099 345 ntBASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 AP006288.1-201ENST00000446065 395 ntBASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 AP000344.2-201ENST00000512987 629 ntBASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 IGHV3-62-201ENST00000520057 340 ntBASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHA4Q9UN74 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms