Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.02□□□□□ -0.16
UBQLN2Q9UHD9 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 AL023284.2-201ENST00000405850 579 ntBASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBQLN2Q9UHD9 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 AC007686.3-201ENST00000619017 3487 ntBASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 AL139327.4-201ENST00000612362 153 ntBASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 PTENP1-202ENST00000532280 3996 ntBASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.01□□□□□ -0.17
UBQLN2Q9UHD9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBQLN2Q9UHD9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14□□□□□ -0.17
UBQLN2Q9UHD9 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
UBQLN2Q9UHD9 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBQLN2Q9UHD9 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBQLN2Q9UHD9 AC004817.3-201ENST00000602957 2129 ntBASIC14□□□□□ -0.17
UBQLN2Q9UHD9 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBQLN2Q9UHD9 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBQLN2Q9UHD9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
UBQLN2Q9UHD9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14□□□□□ -0.17
UBQLN2Q9UHD9 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBQLN2Q9UHD9 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBQLN2Q9UHD9 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14□□□□□ -0.17
UBQLN2Q9UHD9 ST20-AS1-201ENST00000560255 4223 ntBASIC14□□□□□ -0.17
UBQLN2Q9UHD9 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
UBQLN2Q9UHD9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBQLN2Q9UHD9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBQLN2Q9UHD9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
UBQLN2Q9UHD9 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms