Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
RIMBP3Q9UFD9 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RIMBP3Q9UFD9 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RIMBP3Q9UFD9 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
RIMBP3Q9UFD9 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RIMBP3Q9UFD9 NSD1-211ENST00000511258 809 ntTSL 3 BASIC25.53■■□□□ 1.68
RIMBP3Q9UFD9 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
RIMBP3Q9UFD9 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
RIMBP3Q9UFD9 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RIMBP3Q9UFD9 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
RIMBP3Q9UFD9 RN7SL596P-201ENST00000582123 288 ntBASIC25.53■■□□□ 1.68
RIMBP3Q9UFD9 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RIMBP3Q9UFD9 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC25.53■■□□□ 1.68
RIMBP3Q9UFD9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RIMBP3Q9UFD9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RIMBP3Q9UFD9 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
RIMBP3Q9UFD9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC25.53■■□□□ 1.68
RIMBP3Q9UFD9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RIMBP3Q9UFD9 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
RIMBP3Q9UFD9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 AL157792.1-201ENST00000488281 530 ntBASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 PPY2P-201ENST00000582808 702 ntBASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 PDIA3P2-201ENST00000428073 158 ntBASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 AC078991.1-201ENST00000437297 610 ntBASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 RNF41-210ENST00000552244 716 ntTSL 3 BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 AC013467.2-201ENST00000605472 835 ntBASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 AC107373.2-201ENST00000607735 490 ntBASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 AC092171.5-201ENST00000608012 942 ntBASIC25.52■■□□□ 1.68
RIMBP3Q9UFD9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RIMBP3Q9UFD9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RIMBP3Q9UFD9 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RIMBP3Q9UFD9 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RIMBP3Q9UFD9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RIMBP3Q9UFD9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RIMBP3Q9UFD9 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
RIMBP3Q9UFD9 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
RIMBP3Q9UFD9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
RIMBP3Q9UFD9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC25.51■■□□□ 1.67
RIMBP3Q9UFD9 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RIMBP3Q9UFD9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RIMBP3Q9UFD9 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RIMBP3Q9UFD9 AL512430.1-201ENST00000392575 860 ntBASIC25.51■■□□□ 1.67
RIMBP3Q9UFD9 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC25.51■■□□□ 1.67
RIMBP3Q9UFD9 OARD1-204ENST00000464633 717 ntTSL 2 BASIC25.51■■□□□ 1.67
RIMBP3Q9UFD9 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
RIMBP3Q9UFD9 RNA5SP486-201ENST00000515961 83 ntBASIC25.51■■□□□ 1.67
RIMBP3Q9UFD9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RIMBP3Q9UFD9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC25.51■■□□□ 1.67
RIMBP3Q9UFD9 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC25.51■■□□□ 1.67
RIMBP3Q9UFD9 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RIMBP3Q9UFD9 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RIMBP3Q9UFD9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC25.5■■□□□ 1.67
RIMBP3Q9UFD9 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC25.5■■□□□ 1.67
RIMBP3Q9UFD9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RIMBP3Q9UFD9 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RIMBP3Q9UFD9 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RIMBP3Q9UFD9 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC25.5■■□□□ 1.67
RIMBP3Q9UFD9 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC25.5■■□□□ 1.67
RIMBP3Q9UFD9 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC25.5■■□□□ 1.67
RIMBP3Q9UFD9 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
RIMBP3Q9UFD9 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC25.5■■□□□ 1.67
RIMBP3Q9UFD9 AC100757.4-201ENST00000626934 759 ntBASIC25.5■■□□□ 1.67
RIMBP3Q9UFD9 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RIMBP3Q9UFD9 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC25.5■■□□□ 1.67
RIMBP3Q9UFD9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
RIMBP3Q9UFD9 AL354989.2-201ENST00000435838 1540 ntBASIC25.5■■□□□ 1.67
RIMBP3Q9UFD9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC25.5■■□□□ 1.67
RIMBP3Q9UFD9 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
RIMBP3Q9UFD9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC25.49■■□□□ 1.67
RIMBP3Q9UFD9 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms