Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 TREML5P-201ENST00000421694 576 ntBASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 AC140878.1-201ENST00000565277 250 ntBASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 AC027307.2-201ENST00000591252 911 ntBASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 AC008267.7-201ENST00000624570 1194 ntBASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.66■□□□□ 0.58
HDAC6Q9UBN7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 AP000842.3-202ENST00000569238 1080 ntBASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC6Q9UBN7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
HDAC6Q9UBN7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
HDAC6Q9UBN7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 AC131009.4-201ENST00000624048 1740 ntBASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 SPDYE7P-202ENST00000420373 878 ntBASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 ALG1L8P-201ENST00000533887 760 ntBASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 MPDU1-223ENST00000582151 728 ntBASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.64■□□□□ 0.57
HDAC6Q9UBN7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms