Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 AL008721.1-201ENST00000609964 604 ntBASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 BTBD7P1-201ENST00000447253 1453 ntBASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DNMT3BQ9UBC3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 RN7SL618P-201ENST00000477850 296 ntBASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 AC010336.2-201ENST00000564226 506 ntBASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 AC104794.3-201ENST00000566840 1248 ntBASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 AC004790.1-201ENST00000612686 536 ntBASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.11■□□□□ 0.33
DNMT3BQ9UBC3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 AC080080.1-201ENST00000625121 2420 ntBASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 KRT17P7-201ENST00000451704 1104 ntBASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 AC044860.1-202ENST00000559481 777 ntBASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 AC140912.1-201ENST00000577171 1054 ntBASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 AC061975.2-201ENST00000581722 295 ntBASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 AC024267.1-201ENST00000582320 895 ntBASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 AC020765.3-201ENST00000613051 740 ntBASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNMT3BQ9UBC3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms