Protein–RNA interactions for Protein: Q9NUM4

TMEM106B, Transmembrane protein 106B, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106BQ9NUM4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 KRT18P34-201ENST00000488218 1270 ntBASIC14□□□□□ -0.17
TMEM106BQ9NUM4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 KRT8P48-201ENST00000515599 1220 ntBASIC14□□□□□ -0.17
TMEM106BQ9NUM4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 AC022145.2-201ENST00000598203 171 ntBASIC14□□□□□ -0.17
TMEM106BQ9NUM4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 UBALD1-205ENST00000590891 2641 ntBASIC14□□□□□ -0.17
TMEM106BQ9NUM4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14□□□□□ -0.17
TMEM106BQ9NUM4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 AL603756.1-201ENST00000606511 2163 ntBASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 AC004461.1-201ENST00000412461 403 ntBASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 AC079140.1-201ENST00000508039 487 ntBASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.99□□□□□ -0.17
TMEM106BQ9NUM4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM106BQ9NUM4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM106BQ9NUM4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TMEM106BQ9NUM4 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM106BQ9NUM4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM106BQ9NUM4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM106BQ9NUM4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM106BQ9NUM4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TMEM106BQ9NUM4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.98□□□□□ -0.17
TMEM106BQ9NUM4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms