Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
C12orf4Q9NQ89 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.48□□□□□ -0.09
C12orf4Q9NQ89 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.48□□□□□ -0.09
C12orf4Q9NQ89 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
C12orf4Q9NQ89 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 AL671277.2-201ENST00000458060 996 ntBASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 STK19B-204ENST00000512515 211 ntBASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 AP002490.2-201ENST00000524791 560 ntBASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 LINC01238-205ENST00000567549 1107 ntBASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 CICP20-201ENST00000443330 2801 ntBASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
C12orf4Q9NQ89 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 AC063952.2-201ENST00000498792 1227 ntBASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 IGHV3-41-201ENST00000613121 348 ntBASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
C12orf4Q9NQ89 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms