Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 TEX28P1-201ENST00000613479 1221 ntBASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 TEX28P2-201ENST00000617764 1221 ntBASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
KIAA1549Q9HCM3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 AC241585.1-201ENST00000433527 519 ntBASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 AC027369.6-201ENST00000525520 931 ntBASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 LINC02560-201ENST00000596379 459 ntBASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 AC006449.5-201ENST00000610658 2098 ntBASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.59□□□□□ -0.07
KIAA1549Q9HCM3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
KIAA1549Q9HCM3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
KIAA1549Q9HCM3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
KIAA1549Q9HCM3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
KIAA1549Q9HCM3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
KIAA1549Q9HCM3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
KIAA1549Q9HCM3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
KIAA1549Q9HCM3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
KIAA1549Q9HCM3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.58□□□□□ -0.07
KIAA1549Q9HCM3 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.58□□□□□ -0.07
KIAA1549Q9HCM3 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.58□□□□□ -0.07
KIAA1549Q9HCM3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
KIAA1549Q9HCM3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
KIAA1549Q9HCM3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.58□□□□□ -0.07
KIAA1549Q9HCM3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
KIAA1549Q9HCM3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
KIAA1549Q9HCM3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 AC005622.1-201ENST00000636801 1703 ntBASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
KIAA1549Q9HCM3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms