Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PIF1Q9H611 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PIF1Q9H611 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PIF1Q9H611 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PIF1Q9H611 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
PIF1Q9H611 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PIF1Q9H611 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PIF1Q9H611 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.85■□□□□ 0.13
PIF1Q9H611 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PIF1Q9H611 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
PIF1Q9H611 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.85■□□□□ 0.13
PIF1Q9H611 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PIF1Q9H611 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PIF1Q9H611 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PIF1Q9H611 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PIF1Q9H611 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
PIF1Q9H611 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PIF1Q9H611 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PIF1Q9H611 POM121L3P-201ENST00000419331 1163 ntBASIC15.85■□□□□ 0.13
PIF1Q9H611 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.85■□□□□ 0.13
PIF1Q9H611 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.85■□□□□ 0.13
PIF1Q9H611 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PIF1Q9H611 AC012615.1-201ENST00000565797 1299 ntBASIC15.85■□□□□ 0.13
PIF1Q9H611 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PIF1Q9H611 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PIF1Q9H611 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PIF1Q9H611 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
PIF1Q9H611 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.85■□□□□ 0.13
PIF1Q9H611 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PIF1Q9H611 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PIF1Q9H611 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.85■□□□□ 0.13
PIF1Q9H611 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PIF1Q9H611 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PIF1Q9H611 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PIF1Q9H611 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.85■□□□□ 0.13
PIF1Q9H611 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PIF1Q9H611 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.84■□□□□ 0.13
PIF1Q9H611 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PIF1Q9H611 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PIF1Q9H611 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PIF1Q9H611 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PIF1Q9H611 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PIF1Q9H611 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.84■□□□□ 0.13
PIF1Q9H611 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PIF1Q9H611 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PIF1Q9H611 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PIF1Q9H611 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PIF1Q9H611 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PIF1Q9H611 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PIF1Q9H611 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PIF1Q9H611 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.84■□□□□ 0.13
PIF1Q9H611 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PIF1Q9H611 AC092384.3-202ENST00000564646 2873 ntBASIC15.84■□□□□ 0.13
PIF1Q9H611 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
PIF1Q9H611 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PIF1Q9H611 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PIF1Q9H611 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
PIF1Q9H611 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.84■□□□□ 0.13
PIF1Q9H611 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PIF1Q9H611 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PIF1Q9H611 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.84■□□□□ 0.13
PIF1Q9H611 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.84■□□□□ 0.13
PIF1Q9H611 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.84■□□□□ 0.13
PIF1Q9H611 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.84■□□□□ 0.13
PIF1Q9H611 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.84■□□□□ 0.13
PIF1Q9H611 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PIF1Q9H611 AC074051.2-201ENST00000565115 352 ntBASIC15.84■□□□□ 0.13
PIF1Q9H611 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.84■□□□□ 0.13
PIF1Q9H611 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.84■□□□□ 0.13
PIF1Q9H611 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
PIF1Q9H611 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PIF1Q9H611 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PIF1Q9H611 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PIF1Q9H611 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PIF1Q9H611 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PIF1Q9H611 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.84■□□□□ 0.13
PIF1Q9H611 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PIF1Q9H611 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PIF1Q9H611 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PIF1Q9H611 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PIF1Q9H611 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PIF1Q9H611 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PIF1Q9H611 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.84■□□□□ 0.13
PIF1Q9H611 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PIF1Q9H611 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PIF1Q9H611 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PIF1Q9H611 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PIF1Q9H611 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
PIF1Q9H611 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PIF1Q9H611 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
PIF1Q9H611 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
PIF1Q9H611 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PIF1Q9H611 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
PIF1Q9H611 GGT4P-201ENST00000623672 1708 ntBASIC15.83■□□□□ 0.13
PIF1Q9H611 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PIF1Q9H611 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PIF1Q9H611 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PIF1Q9H611 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms