Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 AC002472.2-201ENST00000442739 958 ntBASIC17.74■□□□□ 0.43
NXF3Q9H4D5 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 AC061975.2-201ENST00000581722 295 ntBASIC17.74■□□□□ 0.43
NXF3Q9H4D5 AC138761.1-201ENST00000584393 385 ntBASIC17.74■□□□□ 0.43
NXF3Q9H4D5 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 AL133215.2-201ENST00000609242 977 ntBASIC17.74■□□□□ 0.43
NXF3Q9H4D5 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NXF3Q9H4D5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.73■□□□□ 0.43
NXF3Q9H4D5 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 MRPS18AP1-201ENST00000414458 589 ntBASIC17.73■□□□□ 0.43
NXF3Q9H4D5 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.73■□□□□ 0.43
NXF3Q9H4D5 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 AL589739.1-201ENST00000607720 493 ntBASIC17.73■□□□□ 0.43
NXF3Q9H4D5 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NXF3Q9H4D5 AC005622.1-201ENST00000636801 1703 ntBASIC17.72■□□□□ 0.43
NXF3Q9H4D5 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 CETN4P-206ENST00000642099 2168 ntBASIC17.72■□□□□ 0.43
NXF3Q9H4D5 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 RPL37AP1-201ENST00000412502 279 ntBASIC17.72■□□□□ 0.43
NXF3Q9H4D5 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms