Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTFDC1Q9BY42 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTFDC1Q9BY42 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
RTFDC1Q9BY42 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
RTFDC1Q9BY42 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.83■□□□□ 0.76
RTFDC1Q9BY42 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTFDC1Q9BY42 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.76
RTFDC1Q9BY42 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 GGT4P-201ENST00000623672 1708 ntBASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 AC234783.1-201ENST00000441761 496 ntBASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 KRT223P-202ENST00000449164 1292 ntBASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.82■□□□□ 0.76
RTFDC1Q9BY42 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 ANKRD19P-201ENST00000338192 862 ntBASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 AC092552.1-201ENST00000547243 906 ntBASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 AL391069.4-201ENST00000609583 481 ntBASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.81■□□□□ 0.76
RTFDC1Q9BY42 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 BOLA2P3-201ENST00000404566 256 ntBASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 AL606495.2-201ENST00000605867 535 ntBASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 AC133552.6-201ENST00000613406 534 ntBASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTFDC1Q9BY42 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTFDC1Q9BY42 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms