Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPAP1Q9BWH6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 AC021097.1-201ENST00000607902 574 ntBASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 AL139384.1-201ENST00000612143 3047 ntBASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.98■□□□□ 0.79
RPAP1Q9BWH6 FO538757.1-201ENST00000623083 1397 ntBASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 TREML5P-201ENST00000421694 576 ntBASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 AC002472.2-201ENST00000442739 958 ntBASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 SLC25A39P2-201ENST00000537614 270 ntBASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 MIR6080-201ENST00000617359 66 ntBASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 LINC02199-201ENST00000506655 2702 ntBASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RPAP1Q9BWH6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 MIR346-201ENST00000362234 95 ntBASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 ALG1L8P-201ENST00000533887 760 ntBASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms