Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.66■□□□□ 0.58
PTPN18Q99952 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
PTPN18Q99952 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.66■□□□□ 0.58
PTPN18Q99952 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN18Q99952 AL645728.1-201ENST00000366221 2101 ntBASIC18.65■□□□□ 0.58
PTPN18Q99952 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PTPN18Q99952 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.65■□□□□ 0.58
PTPN18Q99952 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN18Q99952 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PTPN18Q99952 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN18Q99952 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PTPN18Q99952 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN18Q99952 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.65■□□□□ 0.58
PTPN18Q99952 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN18Q99952 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PTPN18Q99952 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPN18Q99952 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN18Q99952 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.65■□□□□ 0.58
PTPN18Q99952 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPN18Q99952 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.65■□□□□ 0.58
PTPN18Q99952 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.65■□□□□ 0.58
PTPN18Q99952 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.65■□□□□ 0.58
PTPN18Q99952 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.65■□□□□ 0.58
PTPN18Q99952 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.65■□□□□ 0.58
PTPN18Q99952 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN18Q99952 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PTPN18Q99952 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN18Q99952 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN18Q99952 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
PTPN18Q99952 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN18Q99952 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN18Q99952 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN18Q99952 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPN18Q99952 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PTPN18Q99952 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.65■□□□□ 0.58
PTPN18Q99952 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
PTPN18Q99952 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN18Q99952 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPN18Q99952 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPN18Q99952 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PTPN18Q99952 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN18Q99952 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN18Q99952 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN18Q99952 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN18Q99952 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PTPN18Q99952 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN18Q99952 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN18Q99952 MIR1247-201ENST00000408206 136 ntBASIC18.64■□□□□ 0.57
PTPN18Q99952 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN18Q99952 GPAA1P2-201ENST00000417923 928 ntBASIC18.64■□□□□ 0.57
PTPN18Q99952 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN18Q99952 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN18Q99952 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN18Q99952 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN18Q99952 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPN18Q99952 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPN18Q99952 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN18Q99952 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPN18Q99952 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN18Q99952 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPN18Q99952 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPN18Q99952 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PTPN18Q99952 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPN18Q99952 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPN18Q99952 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN18Q99952 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN18Q99952 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN18Q99952 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN18Q99952 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN18Q99952 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN18Q99952 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN18Q99952 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPN18Q99952 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN18Q99952 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN18Q99952 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
PTPN18Q99952 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PTPN18Q99952 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPN18Q99952 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPN18Q99952 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN18Q99952 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN18Q99952 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN18Q99952 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN18Q99952 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN18Q99952 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.63■□□□□ 0.57
PTPN18Q99952 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN18Q99952 RPL13P2-201ENST00000440687 659 ntBASIC18.63■□□□□ 0.57
PTPN18Q99952 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN18Q99952 C2orf69P2-201ENST00000562032 1123 ntBASIC18.63■□□□□ 0.57
PTPN18Q99952 AC036164.1-201ENST00000570544 333 ntBASIC18.63■□□□□ 0.57
PTPN18Q99952 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.63■□□□□ 0.57
PTPN18Q99952 BRI3BPP1-201ENST00000594224 787 ntBASIC18.63■□□□□ 0.57
PTPN18Q99952 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN18Q99952 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.63■□□□□ 0.57
PTPN18Q99952 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN18Q99952 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPN18Q99952 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN18Q99952 AC134043.2-201ENST00000624206 2238 ntBASIC18.63■□□□□ 0.57
PTPN18Q99952 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PTPN18Q99952 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PTPN18Q99952 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms