Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.7■□□□□ 0.1
BBS4Q96RK4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.7■□□□□ 0.1
BBS4Q96RK4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
BBS4Q96RK4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
BBS4Q96RK4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BBS4Q96RK4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
BBS4Q96RK4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BBS4Q96RK4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
BBS4Q96RK4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.69■□□□□ 0.1
BBS4Q96RK4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
BBS4Q96RK4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BBS4Q96RK4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
BBS4Q96RK4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
BBS4Q96RK4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BBS4Q96RK4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
BBS4Q96RK4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
BBS4Q96RK4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BBS4Q96RK4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
BBS4Q96RK4 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.69■□□□□ 0.1
BBS4Q96RK4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.69■□□□□ 0.1
BBS4Q96RK4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.69■□□□□ 0.1
BBS4Q96RK4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.69■□□□□ 0.1
BBS4Q96RK4 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.69■□□□□ 0.1
BBS4Q96RK4 Z83851.2-201ENST00000609564 659 ntBASIC15.69■□□□□ 0.1
BBS4Q96RK4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.69■□□□□ 0.1
BBS4Q96RK4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
BBS4Q96RK4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BBS4Q96RK4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.69■□□□□ 0.1
BBS4Q96RK4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.69■□□□□ 0.1
BBS4Q96RK4 DOC2GP-204ENST00000639052 2548 ntBASIC15.69■□□□□ 0.1
BBS4Q96RK4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BBS4Q96RK4 GPAA1P2-202ENST00000606848 1787 ntBASIC15.69■□□□□ 0.1
BBS4Q96RK4 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
BBS4Q96RK4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BBS4Q96RK4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
BBS4Q96RK4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
BBS4Q96RK4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
BBS4Q96RK4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
BBS4Q96RK4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
BBS4Q96RK4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.68■□□□□ 0.1
BBS4Q96RK4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BBS4Q96RK4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BBS4Q96RK4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BBS4Q96RK4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BBS4Q96RK4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BBS4Q96RK4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
BBS4Q96RK4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
BBS4Q96RK4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
BBS4Q96RK4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.68■□□□□ 0.1
BBS4Q96RK4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
BBS4Q96RK4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BBS4Q96RK4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
BBS4Q96RK4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
BBS4Q96RK4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BBS4Q96RK4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BBS4Q96RK4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BBS4Q96RK4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.68■□□□□ 0.1
BBS4Q96RK4 AL031432.2-201ENST00000566714 459 ntBASIC15.68■□□□□ 0.1
BBS4Q96RK4 AL928711.1-201ENST00000570165 459 ntBASIC15.68■□□□□ 0.1
BBS4Q96RK4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.68■□□□□ 0.1
BBS4Q96RK4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.68■□□□□ 0.1
BBS4Q96RK4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.68■□□□□ 0.1
BBS4Q96RK4 AL645728.2-201ENST00000641974 660 ntBASIC15.68■□□□□ 0.1
BBS4Q96RK4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BBS4Q96RK4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.68■□□□□ 0.1
BBS4Q96RK4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BBS4Q96RK4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
BBS4Q96RK4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.68■□□□□ 0.1
BBS4Q96RK4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BBS4Q96RK4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.68■□□□□ 0.1
BBS4Q96RK4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
BBS4Q96RK4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.68■□□□□ 0.1
BBS4Q96RK4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
BBS4Q96RK4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BBS4Q96RK4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
BBS4Q96RK4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BBS4Q96RK4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BBS4Q96RK4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
BBS4Q96RK4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.67■□□□□ 0.1
BBS4Q96RK4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.67■□□□□ 0.1
BBS4Q96RK4 PCGF3-213ENST00000620529 1899 ntBASIC15.67■□□□□ 0.1
BBS4Q96RK4 CYP2T1P-202ENST00000641596 2535 ntBASIC15.67■□□□□ 0.1
BBS4Q96RK4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.67■□□□□ 0.1
BBS4Q96RK4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BBS4Q96RK4 AC067930.6-201ENST00000623257 4947 ntBASIC15.67■□□□□ 0.1
BBS4Q96RK4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
BBS4Q96RK4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.67■□□□□ 0.1
BBS4Q96RK4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
BBS4Q96RK4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BBS4Q96RK4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
BBS4Q96RK4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.67■□□□□ 0.1
BBS4Q96RK4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms