Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC85AQ96PX6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC85AQ96PX6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC85AQ96PX6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 AC022144.1-201ENST00000602255 1580 ntBASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 FAM207CP-201ENST00000443486 507 ntBASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 AC093724.1-201ENST00000448659 1027 ntBASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 TEX28P1-201ENST00000613479 1221 ntBASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 TEX28P2-201ENST00000617764 1221 ntBASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CCDC85AQ96PX6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 HLA-V-204ENST00000476601 1289 ntBASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CCDC85AQ96PX6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 AC005034.1-201ENST00000426657 489 ntBASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 AP005018.1-201ENST00000525475 301 ntBASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 AL133215.2-201ENST00000609242 977 ntBASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 AL035252.4-201ENST00000624174 288 ntBASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 AL139011.1-202ENST00000642063 584 ntBASIC20.4■□□□□ 0.86
CCDC85AQ96PX6 CETN4P-206ENST00000642099 2168 ntBASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms