Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NBPF4Q96M43 AC026471.1-201ENST00000564629 3026 ntBASIC21.53■■□□□ 1.04
NBPF4Q96M43 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.52■■□□□ 1.04
NBPF4Q96M43 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
NBPF4Q96M43 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.52■■□□□ 1.04
NBPF4Q96M43 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
NBPF4Q96M43 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
NBPF4Q96M43 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC21.52■■□□□ 1.04
NBPF4Q96M43 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC21.52■■□□□ 1.04
NBPF4Q96M43 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NBPF4Q96M43 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NBPF4Q96M43 AC112492.5-201ENST00000421897 457 ntBASIC21.52■■□□□ 1.04
NBPF4Q96M43 MYCLP2-201ENST00000449268 967 ntBASIC21.52■■□□□ 1.04
NBPF4Q96M43 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC21.52■■□□□ 1.04
NBPF4Q96M43 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC21.52■■□□□ 1.04
NBPF4Q96M43 AC099568.2-201ENST00000609194 695 ntBASIC21.52■■□□□ 1.04
NBPF4Q96M43 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC21.52■■□□□ 1.04
NBPF4Q96M43 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NBPF4Q96M43 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.52■■□□□ 1.03
NBPF4Q96M43 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NBPF4Q96M43 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NBPF4Q96M43 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
NBPF4Q96M43 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC21.52■■□□□ 1.03
NBPF4Q96M43 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF4Q96M43 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.51■■□□□ 1.03
NBPF4Q96M43 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
NBPF4Q96M43 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF4Q96M43 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF4Q96M43 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC21.51■■□□□ 1.03
NBPF4Q96M43 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF4Q96M43 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF4Q96M43 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.51■■□□□ 1.03
NBPF4Q96M43 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
NBPF4Q96M43 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF4Q96M43 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF4Q96M43 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF4Q96M43 ACA64.2-201ENST00000459014 129 ntBASIC21.51■■□□□ 1.03
NBPF4Q96M43 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC21.51■■□□□ 1.03
NBPF4Q96M43 AC092337.1-201ENST00000568699 1129 ntBASIC21.51■■□□□ 1.03
NBPF4Q96M43 AC025048.3-201ENST00000590609 569 ntBASIC21.51■■□□□ 1.03
NBPF4Q96M43 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC21.51■■□□□ 1.03
NBPF4Q96M43 AC005702.4-201ENST00000618393 416 ntBASIC21.51■■□□□ 1.03
NBPF4Q96M43 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF4Q96M43 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC21.51■■□□□ 1.03
NBPF4Q96M43 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
NBPF4Q96M43 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF4Q96M43 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
NBPF4Q96M43 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NBPF4Q96M43 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NBPF4Q96M43 RNF216P1-203ENST00000404404 2427 ntBASIC21.5■■□□□ 1.03
NBPF4Q96M43 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
NBPF4Q96M43 AC105020.1-201ENST00000435356 2205 ntBASIC21.5■■□□□ 1.03
NBPF4Q96M43 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC21.5■■□□□ 1.03
NBPF4Q96M43 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC21.5■■□□□ 1.03
NBPF4Q96M43 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.5■■□□□ 1.03
NBPF4Q96M43 AC123567.1-201ENST00000548294 1261 ntBASIC21.5■■□□□ 1.03
NBPF4Q96M43 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC21.5■■□□□ 1.03
NBPF4Q96M43 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
NBPF4Q96M43 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
NBPF4Q96M43 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NBPF4Q96M43 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
NBPF4Q96M43 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC21.5■■□□□ 1.03
NBPF4Q96M43 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC21.5■■□□□ 1.03
NBPF4Q96M43 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NBPF4Q96M43 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.5■■□□□ 1.03
NBPF4Q96M43 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF4Q96M43 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF4Q96M43 CYP4F24P-201ENST00000586049 1580 ntBASIC21.49■■□□□ 1.03
NBPF4Q96M43 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF4Q96M43 AP001094.4-201ENST00000579008 2176 ntBASIC21.49■■□□□ 1.03
NBPF4Q96M43 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF4Q96M43 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
NBPF4Q96M43 PTK7-212ENST00000476760 902 ntTSL 2 BASIC21.49■■□□□ 1.03
NBPF4Q96M43 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC21.49■■□□□ 1.03
NBPF4Q96M43 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC21.49■■□□□ 1.03
NBPF4Q96M43 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC21.49■■□□□ 1.03
NBPF4Q96M43 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
NBPF4Q96M43 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC21.49■■□□□ 1.03
NBPF4Q96M43 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF4Q96M43 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF4Q96M43 GGT3P-204ENST00000453783 1664 ntBASIC21.49■■□□□ 1.03
NBPF4Q96M43 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF4Q96M43 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF4Q96M43 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF4Q96M43 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF4Q96M43 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC21.49■■□□□ 1.03
NBPF4Q96M43 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
NBPF4Q96M43 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC21.49■■□□□ 1.03
NBPF4Q96M43 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF4Q96M43 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF4Q96M43 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF4Q96M43 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF4Q96M43 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF4Q96M43 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC21.48■■□□□ 1.03
NBPF4Q96M43 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF4Q96M43 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.48■■□□□ 1.03
NBPF4Q96M43 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF4Q96M43 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF4Q96M43 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NBPF4Q96M43 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms