Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SMARCD1Q96GM5 AL589702.1-201ENST00000641229 1509 ntBASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 AC005622.1-201ENST00000636801 1703 ntBASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 AC106028.4-201ENST00000614509 607 ntBASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.31■□□□□ 0.36
SMARCD1Q96GM5 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 CYMP-203ENST00000474680 1263 ntBASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 RNA5SP410-201ENST00000516285 106 ntBASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 AC018529.1-201ENST00000613063 361 ntBASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 AC008677.1-201ENST00000519230 1561 ntBASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 U82695.1-201ENST00000635752 1889 ntBASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SMARCD1Q96GM5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms