Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.26■□□□□ 0.03
CTHRC1Q96CG8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.26■□□□□ 0.03
CTHRC1Q96CG8 AC055717.3-201ENST00000622967 595 ntBASIC15.26■□□□□ 0.03
CTHRC1Q96CG8 AL513210.1-201ENST00000629608 234 ntBASIC15.26■□□□□ 0.03
CTHRC1Q96CG8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTHRC1Q96CG8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTHRC1Q96CG8 AL391005.1-201ENST00000623953 2435 ntBASIC15.26■□□□□ 0.03
CTHRC1Q96CG8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTHRC1Q96CG8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CTHRC1Q96CG8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CTHRC1Q96CG8 AC026691.1-201ENST00000602502 2017 ntBASIC15.26■□□□□ 0.03
CTHRC1Q96CG8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.26■□□□□ 0.03
CTHRC1Q96CG8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.26■□□□□ 0.03
CTHRC1Q96CG8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 TIMM8BP1-201ENST00000452384 211 ntBASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 AC098859.1-201ENST00000502915 1238 ntBASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 AP000842.3-202ENST00000569238 1080 ntBASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 AC022145.2-201ENST00000598203 171 ntBASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 AL365330.1-201ENST00000607459 531 ntBASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTHRC1Q96CG8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 AL513523.2-202ENST00000427283 2040 ntBASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 SPTSSB-204ENST00000617024 1292 ntBASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTHRC1Q96CG8 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms