Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
RFT1Q96AA3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RFT1Q96AA3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 TUBB8P12-201ENST00000308911 1335 ntBASIC14.69□□□□□ -0.06
RFT1Q96AA3 TUBB7P-202ENST00000428444 1305 ntBASIC14.69□□□□□ -0.06
RFT1Q96AA3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 TUBB8P7-204ENST00000567960 1332 ntBASIC14.69□□□□□ -0.06
RFT1Q96AA3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 DRAXINP1-201ENST00000437611 948 ntBASIC14.69□□□□□ -0.06
RFT1Q96AA3 AP000867.3-201ENST00000524675 377 ntBASIC14.69□□□□□ -0.06
RFT1Q96AA3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RFT1Q96AA3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RFT1Q96AA3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RFT1Q96AA3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RFT1Q96AA3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms