Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 AC099568.2-201ENST00000609194 695 ntBASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RAPGEF4Q8WZA2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 AL133373.2-201ENST00000623187 2828 ntBASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 AC079776.1-201ENST00000401540 1152 ntBASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 AL589987.1-201ENST00000453380 819 ntBASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RAPGEF4Q8WZA2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
RAPGEF4Q8WZA2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC21.45■■□□□ 1.03
RAPGEF4Q8WZA2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC21.45■■□□□ 1.03
RAPGEF4Q8WZA2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
RAPGEF4Q8WZA2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
RAPGEF4Q8WZA2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 ACA64.2-201ENST00000459014 129 ntBASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RAPGEF4Q8WZA2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 RN7SL837P-201ENST00000463010 287 ntBASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 AC123567.1-201ENST00000548294 1261 ntBASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 AC106886.1-201ENST00000568660 600 ntBASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RAPGEF4Q8WZA2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms