Protein–RNA interactions for Protein: Q8TBY8

PMFBP1, Polyamine-modulated factor 1-binding protein 1, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1Q8TBY8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PMFBP1Q8TBY8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PMFBP1Q8TBY8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PMFBP1Q8TBY8 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC22.57■■□□□ 1.2
PMFBP1Q8TBY8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 AC023310.3-201ENST00000557027 670 ntBASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 AC100756.1-201ENST00000562736 682 ntBASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 AC138749.3-201ENST00000567691 622 ntBASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 CTBP2P3-201ENST00000585629 1255 ntBASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 AC116165.1-201ENST00000611806 668 ntBASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 IMPDH1P4-201ENST00000445028 1534 ntBASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
PMFBP1Q8TBY8 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 RAB43P1-201ENST00000561790 589 ntBASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 Six3os1_5.1-201ENST00000611000 271 ntBASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 AL033527.5-202ENST00000641632 1098 ntBASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 FZD10-202ENST00000539839 3282 ntBASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
PMFBP1Q8TBY8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 AC098850.1-201ENST00000419919 790 ntBASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 TMEM14DP-201ENST00000422205 345 ntBASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 AC093724.1-201ENST00000448659 1027 ntBASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 AC061975.2-201ENST00000581722 295 ntBASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 MIR4259-201ENST00000584466 101 ntBASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PMFBP1Q8TBY8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PMFBP1Q8TBY8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PMFBP1Q8TBY8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms