Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 AC015922.1-201ENST00000421102 1152 ntBASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 FAM207CP-201ENST00000443486 507 ntBASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 AC003101.2-201ENST00000612557 442 ntBASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 AC008761.3-201ENST00000624803 892 ntBASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 AF228730.6-201ENST00000641497 218 ntBASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 AC084121.3-201ENST00000641716 218 ntBASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 AC105233.6-201ENST00000642093 218 ntBASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 AC006277.1-201ENST00000624348 1610 ntBASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHKBP1Q8TBC3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 AC241585.1-201ENST00000433527 519 ntBASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 AC004890.2-204ENST00000481968 304 ntBASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 AC013467.2-201ENST00000605472 835 ntBASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 AC073592.8-201ENST00000624126 511 ntBASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 HTR7P1-202ENST00000624664 4411 ntBASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHKBP1Q8TBC3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 AC027369.6-201ENST00000525520 931 ntBASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.29■□□□□ 0.36
SHKBP1Q8TBC3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms