Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 AC092474.2-201ENST00000424288 719 ntBASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 KRT18P34-201ENST00000488218 1270 ntBASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 AC002347.1-201ENST00000569543 541 ntBASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SRFBP1Q8NEF9 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SRFBP1Q8NEF9 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 AL596257.1-201ENST00000641463 2694 ntBASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 PMS2P7-201ENST00000506558 1336 ntBASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 MIR940-201ENST00000401276 94 ntBASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.77■□□□□ 0.12
SRFBP1Q8NEF9 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms