Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 AC109322.1-201ENST00000524499 1264 ntBASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 AC107918.2-201ENST00000530817 355 ntBASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC33Q8N5R6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 AC129492.6-201ENST00000611383 1305 ntBASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 SLC22A20-204ENST00000530038 1673 ntBASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CCDC33Q8N5R6 LINC02199-201ENST00000506655 2702 ntBASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 TOP3BP1-201ENST00000420768 1380 ntBASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 AC023141.5-201ENST00000458585 616 ntBASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 HLA-J-203ENST00000494367 1087 ntBASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 AC025678.2-201ENST00000562061 970 ntBASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 LINC00628-201ENST00000628516 1289 ntBASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CCDC33Q8N5R6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC33Q8N5R6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC33Q8N5R6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC33Q8N5R6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC33Q8N5R6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.33■□□□□ 0.37
CCDC33Q8N5R6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC33Q8N5R6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CCDC33Q8N5R6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
CCDC33Q8N5R6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC33Q8N5R6 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms