Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC01561Q8N1V8 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 AL122018.1-201ENST00000446607 2310 ntBASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 FICD-205ENST00000552758 603 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 AC064862.7-201ENST00000604520 867 ntBASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
LINC01561Q8N1V8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 CDC14C-201ENST00000428251 1719 ntBASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 AC069224.1-201ENST00000566372 1715 ntBASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 AC129492.6-201ENST00000611383 1305 ntBASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 AC112504.1-201ENST00000623415 1841 ntBASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 PAUPAR-201ENST00000630360 2965 ntBASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
LINC01561Q8N1V8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms