Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.88■□□□□ 0.29
SIX5Q8N196 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 SPDYE18-201ENST00000510091 1050 ntBASIC16.88■□□□□ 0.29
SIX5Q8N196 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.88■□□□□ 0.29
SIX5Q8N196 AC055876.2-201ENST00000531834 546 ntBASIC16.88■□□□□ 0.29
SIX5Q8N196 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.88■□□□□ 0.29
SIX5Q8N196 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.88■□□□□ 0.29
SIX5Q8N196 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.88■□□□□ 0.29
SIX5Q8N196 AC044860.1-202ENST00000559481 777 ntBASIC16.88■□□□□ 0.29
SIX5Q8N196 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.88■□□□□ 0.29
SIX5Q8N196 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
SIX5Q8N196 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.88■□□□□ 0.29
SIX5Q8N196 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.88■□□□□ 0.29
SIX5Q8N196 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.88■□□□□ 0.29
SIX5Q8N196 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
SIX5Q8N196 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIX5Q8N196 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.87■□□□□ 0.29
SIX5Q8N196 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIX5Q8N196 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
SIX5Q8N196 AC073439.1-201ENST00000624121 1774 ntBASIC16.87■□□□□ 0.29
SIX5Q8N196 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SIX5Q8N196 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
SIX5Q8N196 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIX5Q8N196 FAM86MP-201ENST00000340703 885 ntBASIC16.87■□□□□ 0.29
SIX5Q8N196 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIX5Q8N196 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
SIX5Q8N196 SLC25A6P5-201ENST00000435663 894 ntBASIC16.87■□□□□ 0.29
SIX5Q8N196 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.87■□□□□ 0.29
SIX5Q8N196 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.87■□□□□ 0.29
SIX5Q8N196 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.87■□□□□ 0.29
SIX5Q8N196 FAM8A2P-201ENST00000528813 1142 ntBASIC16.87■□□□□ 0.29
SIX5Q8N196 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.87■□□□□ 0.29
SIX5Q8N196 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SIX5Q8N196 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SIX5Q8N196 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIX5Q8N196 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.87■□□□□ 0.29
SIX5Q8N196 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SIX5Q8N196 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIX5Q8N196 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.87■□□□□ 0.29
SIX5Q8N196 AC099568.2-201ENST00000609194 695 ntBASIC16.87■□□□□ 0.29
SIX5Q8N196 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SIX5Q8N196 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.87■□□□□ 0.29
SIX5Q8N196 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SIX5Q8N196 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.87■□□□□ 0.29
SIX5Q8N196 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SIX5Q8N196 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.87■□□□□ 0.29
SIX5Q8N196 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIX5Q8N196 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIX5Q8N196 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.87■□□□□ 0.29
SIX5Q8N196 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIX5Q8N196 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SIX5Q8N196 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIX5Q8N196 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.87■□□□□ 0.29
SIX5Q8N196 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.87■□□□□ 0.29
SIX5Q8N196 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SIX5Q8N196 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SIX5Q8N196 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SIX5Q8N196 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SIX5Q8N196 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.87■□□□□ 0.29
SIX5Q8N196 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SIX5Q8N196 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.86■□□□□ 0.29
SIX5Q8N196 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX5Q8N196 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX5Q8N196 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX5Q8N196 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SIX5Q8N196 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.86■□□□□ 0.29
SIX5Q8N196 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.86■□□□□ 0.29
SIX5Q8N196 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.86■□□□□ 0.29
SIX5Q8N196 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX5Q8N196 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SIX5Q8N196 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SIX5Q8N196 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SIX5Q8N196 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.86■□□□□ 0.29
SIX5Q8N196 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX5Q8N196 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX5Q8N196 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SIX5Q8N196 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.86■□□□□ 0.29
SIX5Q8N196 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.86■□□□□ 0.29
SIX5Q8N196 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SIX5Q8N196 MYCLP2-201ENST00000449268 967 ntBASIC16.86■□□□□ 0.29
SIX5Q8N196 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.86■□□□□ 0.29
SIX5Q8N196 AC098859.1-201ENST00000502915 1238 ntBASIC16.86■□□□□ 0.29
SIX5Q8N196 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.86■□□□□ 0.29
SIX5Q8N196 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms