Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 HCG4-201ENST00000418983 998 ntBASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 AC005412.3-201ENST00000580309 715 ntBASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 AC138894.3-201ENST00000603787 634 ntBASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 AC092119.3-201ENST00000612618 583 ntBASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 PGM5P2-202ENST00000637225 1043 ntBASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 AL805961.1-202ENST00000641562 540 ntBASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 TSPY26P-202ENST00000565928 3884 ntBASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC170Q8IYT3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 MTDHP3-201ENST00000594186 672 ntBASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC170Q8IYT3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.77■□□□□ 0.43
CCDC170Q8IYT3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CCDC170Q8IYT3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC170Q8IYT3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC170Q8IYT3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC170Q8IYT3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC170Q8IYT3 AL592424.1-201ENST00000563624 1536 ntBASIC17.77■□□□□ 0.43
CCDC170Q8IYT3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.77■□□□□ 0.43
CCDC170Q8IYT3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC170Q8IYT3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCDC170Q8IYT3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CCDC170Q8IYT3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms