Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 AL022342.1-201ENST00000400363 863 ntBASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCDC65Q8IXS2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC65Q8IXS2 DOC2GP-204ENST00000639052 2548 ntBASIC18.33■□□□□ 0.53
CCDC65Q8IXS2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC65Q8IXS2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC65Q8IXS2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC65Q8IXS2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC65Q8IXS2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC65Q8IXS2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC65Q8IXS2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC65Q8IXS2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.33■□□□□ 0.53
CCDC65Q8IXS2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC65Q8IXS2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CCDC65Q8IXS2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC65Q8IXS2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC65Q8IXS2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC65Q8IXS2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC65Q8IXS2 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC65Q8IXS2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC65Q8IXS2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC65Q8IXS2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC65Q8IXS2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC65Q8IXS2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC65Q8IXS2 AC092865.6-201ENST00000642101 219 ntBASIC18.33■□□□□ 0.52
CCDC65Q8IXS2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CCDC65Q8IXS2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC65Q8IXS2 AC092919.2-201ENST00000623631 1645 ntBASIC18.33■□□□□ 0.52
CCDC65Q8IXS2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC65Q8IXS2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC65Q8IXS2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC65Q8IXS2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC65Q8IXS2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC65Q8IXS2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CCDC65Q8IXS2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC65Q8IXS2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.33■□□□□ 0.52
CCDC65Q8IXS2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC65Q8IXS2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 MIR940-201ENST00000401276 94 ntBASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 KRT18P34-201ENST00000488218 1270 ntBASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 KRT18P58-201ENST00000527480 1120 ntBASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC65Q8IXS2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms