Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM42Q8IWZ5 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.55■□□□□ 0.24
TRIM42Q8IWZ5 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 AC243591.1-201ENST00000452967 1364 ntBASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 AC099063.4-201ENST00000641099 1602 ntBASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 AL671710.1-201ENST00000610245 2349 ntBASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM42Q8IWZ5 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms