Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM50Q86XT4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 TERF1P3-201ENST00000505638 1227 ntBASIC18.36■□□□□ 0.53
TRIM50Q86XT4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 AL590560.3-201ENST00000623350 461 ntBASIC18.36■□□□□ 0.53
TRIM50Q86XT4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM50Q86XT4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 AC105020.1-201ENST00000435356 2205 ntBASIC18.35■□□□□ 0.53
TRIM50Q86XT4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 GPAA1P2-202ENST00000606848 1787 ntBASIC18.35■□□□□ 0.53
TRIM50Q86XT4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 MTND6P24-201ENST00000440466 518 ntBASIC18.35■□□□□ 0.53
TRIM50Q86XT4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 AC098859.1-201ENST00000502915 1238 ntBASIC18.35■□□□□ 0.53
TRIM50Q86XT4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 AP002490.2-201ENST00000524791 560 ntBASIC18.35■□□□□ 0.53
TRIM50Q86XT4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 LINC02560-201ENST00000596379 459 ntBASIC18.35■□□□□ 0.53
TRIM50Q86XT4 AC008761.3-201ENST00000624803 892 ntBASIC18.35■□□□□ 0.53
TRIM50Q86XT4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM50Q86XT4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 AL353705.2-201ENST00000428243 662 ntBASIC18.34■□□□□ 0.53
TRIM50Q86XT4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM50Q86XT4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms