Protein–RNA interactions for Protein: Q86UP8

GTF2IRD2, General transcription factor II-I repeat domain-containing protein 2A, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2Q86UP8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GTF2IRD2Q86UP8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.56■□□□□ 0.08
GTF2IRD2Q86UP8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.56■□□□□ 0.08
GTF2IRD2Q86UP8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
GTF2IRD2Q86UP8 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.56■□□□□ 0.08
GTF2IRD2Q86UP8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 FAM45BP-202ENST00000592932 1624 ntBASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 LAGE3P1-201ENST00000425356 484 ntBASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 AC018712.1-201ENST00000455767 687 ntBASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 AC006557.2-201ENST00000592985 1240 ntBASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.55■□□□□ 0.08
GTF2IRD2Q86UP8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 NCF1C-201ENST00000438382 1427 ntBASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 AL645728.1-201ENST00000366221 2101 ntBASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 MRPL3P1-201ENST00000400109 1033 ntBASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 AC079776.4-201ENST00000511039 504 ntBASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 AL603832.2-201ENST00000566195 2125 ntBASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 PGM5P2-202ENST00000637225 1043 ntBASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 AC107918.4-202ENST00000641623 219 ntBASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
GTF2IRD2Q86UP8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms