Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 AGER-203ENST00000375065 665 ntTSL 2 BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 AL353705.2-201ENST00000428243 662 ntBASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 FAM86HP-204ENST00000513466 959 ntBASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 KRT8P19-201ENST00000551916 1455 ntBASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 AC020765.3-201ENST00000613051 740 ntBASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC10.02□□□□□ -0.81
VPS13BQ7Z7G8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 CTBP2P5-201ENST00000454986 1264 ntBASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 MIR4722-201ENST00000578292 60 ntBASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 OSM-203ENST00000403463 464 ntTSL 3 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 NEU3-203ENST00000529024 581 ntTSL 3 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 AC021097.1-201ENST00000607902 574 ntBASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 MIR6727-201ENST00000620702 65 ntBASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
VPS13BQ7Z7G8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC10□□□□□ -0.81
VPS13BQ7Z7G8 AC092506.1-202ENST00000401022 528 ntBASIC10□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms