Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXR1Q6PIV2 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 RPS2P28-201ENST00000314255 741 ntBASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 AC005336.2-201ENST00000593183 939 ntBASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 AC008687.5-201ENST00000593746 558 ntBASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 FAM215A-202ENST00000632077 792 ntBASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXR1Q6PIV2 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 AC022898.2-201ENST00000616822 1312 ntBASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 AC018712.1-201ENST00000455767 687 ntBASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 FGFR3P6-201ENST00000457012 610 ntBASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 AP001269.4-201ENST00000609611 512 ntBASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 AC116407.3-201ENST00000623905 1129 ntBASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.28■□□□□ 0.36
FOXR1Q6PIV2 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXR1Q6PIV2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms