Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 TFAMP1-201ENST00000412727 736 ntBASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 RARRES2P8-201ENST00000566335 367 ntBASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 AC027612.4-201ENST00000605371 583 ntBASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 AC013467.2-201ENST00000605472 835 ntBASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 AC026120.1-201ENST00000611536 926 ntBASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 AL161645.1-201ENST00000622716 1255 ntBASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 SNX33P1-201ENST00000592116 1762 ntBASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 LINC00895-201ENST00000629028 1637 ntBASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
RFWD3Q6PCD5 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 AC068418.2-201ENST00000577309 3703 ntBASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 PMS2P4-201ENST00000412466 1052 ntBASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 SPDYE11-202ENST00000450699 704 ntBASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 AP000344.2-201ENST00000512987 629 ntBASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 AC243562.1-201ENST00000560672 389 ntBASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 SPDYE9P-201ENST00000570642 692 ntBASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 SPDYE10P-202ENST00000612005 668 ntBASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 SPDYE8P-202ENST00000612377 668 ntBASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.23■□□□□ 0.35
RFWD3Q6PCD5 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 RNF216P1-203ENST00000404404 2427 ntBASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFWD3Q6PCD5 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms