Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NIPAL3Q6P499 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.09■□□□□ 0.01
NIPAL3Q6P499 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
NIPAL3Q6P499 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
NIPAL3Q6P499 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
NIPAL3Q6P499 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NIPAL3Q6P499 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
NIPAL3Q6P499 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
NIPAL3Q6P499 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
NIPAL3Q6P499 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.08■□□□□ 0.01
NIPAL3Q6P499 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
NIPAL3Q6P499 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
NIPAL3Q6P499 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NIPAL3Q6P499 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
NIPAL3Q6P499 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NIPAL3Q6P499 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NIPAL3Q6P499 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.08■□□□□ 0
NIPAL3Q6P499 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
NIPAL3Q6P499 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
NIPAL3Q6P499 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.08■□□□□ 0
NIPAL3Q6P499 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NIPAL3Q6P499 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NIPAL3Q6P499 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
NIPAL3Q6P499 AL590627.1-203ENST00000421194 1026 ntBASIC15.08■□□□□ 0
NIPAL3Q6P499 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.08■□□□□ 0
NIPAL3Q6P499 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.08■□□□□ 0
NIPAL3Q6P499 SLC25A6P2-201ENST00000497974 877 ntBASIC15.08■□□□□ 0
NIPAL3Q6P499 RNA5SP415-201ENST00000517246 115 ntBASIC15.08■□□□□ 0
NIPAL3Q6P499 UNC93B6-202ENST00000528242 690 ntBASIC15.08■□□□□ 0
NIPAL3Q6P499 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.08■□□□□ 0
NIPAL3Q6P499 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.08■□□□□ 0
NIPAL3Q6P499 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.08■□□□□ 0
NIPAL3Q6P499 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.08■□□□□ 0
NIPAL3Q6P499 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.08■□□□□ 0
NIPAL3Q6P499 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.08■□□□□ 0
NIPAL3Q6P499 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.08■□□□□ 0
NIPAL3Q6P499 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NIPAL3Q6P499 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
NIPAL3Q6P499 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.08■□□□□ 0
NIPAL3Q6P499 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NIPAL3Q6P499 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.08■□□□□ 0
NIPAL3Q6P499 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
NIPAL3Q6P499 AC002310.6-201ENST00000624451 1377 ntBASIC15.08■□□□□ 0
NIPAL3Q6P499 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.08■□□□□ 0
NIPAL3Q6P499 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NIPAL3Q6P499 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.08■□□□□ 0
NIPAL3Q6P499 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
NIPAL3Q6P499 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NIPAL3Q6P499 AL596087.1-201ENST00000400979 1969 ntBASIC15.07■□□□□ 0
NIPAL3Q6P499 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.07■□□□□ 0
NIPAL3Q6P499 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NIPAL3Q6P499 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NIPAL3Q6P499 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
NIPAL3Q6P499 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NIPAL3Q6P499 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.07■□□□□ 0
NIPAL3Q6P499 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.07■□□□□ 0
NIPAL3Q6P499 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.07■□□□□ 0
NIPAL3Q6P499 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.07■□□□□ 0
NIPAL3Q6P499 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.07■□□□□ 0
NIPAL3Q6P499 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NIPAL3Q6P499 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NIPAL3Q6P499 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NIPAL3Q6P499 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
NIPAL3Q6P499 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.07■□□□□ 0
NIPAL3Q6P499 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.07■□□□□ 0
NIPAL3Q6P499 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
NIPAL3Q6P499 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NIPAL3Q6P499 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NIPAL3Q6P499 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NIPAL3Q6P499 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.07■□□□□ 0
NIPAL3Q6P499 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NIPAL3Q6P499 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.07■□□□□ 0
NIPAL3Q6P499 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.07■□□□□ 0
NIPAL3Q6P499 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.07■□□□□ 0
NIPAL3Q6P499 IGHV3-22-201ENST00000520721 359 ntBASIC15.07■□□□□ 0
NIPAL3Q6P499 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.07■□□□□ 0
NIPAL3Q6P499 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.07■□□□□ 0
NIPAL3Q6P499 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.07■□□□□ 0
NIPAL3Q6P499 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NIPAL3Q6P499 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.07■□□□□ 0
NIPAL3Q6P499 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NIPAL3Q6P499 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
NIPAL3Q6P499 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.07■□□□□ 0
NIPAL3Q6P499 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NIPAL3Q6P499 IL9RP2-201ENST00000423948 1312 ntBASIC15.07■□□□□ 0
NIPAL3Q6P499 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.07■□□□□ 0
NIPAL3Q6P499 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.07■□□□□ 0
NIPAL3Q6P499 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NIPAL3Q6P499 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
NIPAL3Q6P499 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
NIPAL3Q6P499 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
NIPAL3Q6P499 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NIPAL3Q6P499 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
NIPAL3Q6P499 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
NIPAL3Q6P499 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
NIPAL3Q6P499 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.07■□□□□ 0
NIPAL3Q6P499 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.07■□□□□ 0
NIPAL3Q6P499 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.07■□□□□ 0
NIPAL3Q6P499 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.07■□□□□ 0
NIPAL3Q6P499 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms