Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PPP4R3AQ6IN85 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 AC105339.1-204ENST00000636249 355 ntBASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 ALOX12P2-203ENST00000570921 1945 ntBASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PPP4R3AQ6IN85 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 KRT8P48-201ENST00000515599 1220 ntBASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 AC055717.3-201ENST00000622967 595 ntBASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PPP4R3AQ6IN85 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PPP4R3AQ6IN85 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.72■□□□□ 0.59
PPP4R3AQ6IN85 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
PPP4R3AQ6IN85 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms