Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 PPA1-206ENST00000625364 644 ntTSL 5 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 U82695.1-201ENST00000635752 1889 ntBASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 AC068587.10-201ENST00000641210 219 ntBASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 RPL13AP20-201ENST00000459725 609 ntBASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 DUX4L45-201ENST00000566406 1057 ntBASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 BRI3BPP1-201ENST00000594224 787 ntBASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 RNF216P1-203ENST00000404404 2427 ntBASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 TUBB8P12-201ENST00000308911 1335 ntBASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 TUBB7P-202ENST00000428444 1305 ntBASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 TUBB8P7-204ENST00000567960 1332 ntBASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 MIR1247-201ENST00000408206 136 ntBASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 TOMM22P5-201ENST00000416399 439 ntBASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 HNRNPA1P13-201ENST00000510646 963 ntBASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 C2orf69P2-201ENST00000562032 1123 ntBASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 AC015910.1-201ENST00000579400 975 ntBASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13DQ5THJ4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms