Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC144BQ3MJ40 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC144BQ3MJ40 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC144BQ3MJ40 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 MIR4745-201ENST00000577608 62 ntBASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 AKAP8P1-201ENST00000434743 1349 ntBASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 AC103702.1-201ENST00000548801 2630 ntBASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 PAUPAR-201ENST00000630360 2965 ntBASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 HYMAI-201ENST00000635591 3347 ntBASIC19.17■□□□□ 0.66
CCDC144BQ3MJ40 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 CNN2P2-201ENST00000443536 909 ntBASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 CNN2P3-201ENST00000450201 906 ntBASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 AC138761.1-201ENST00000584393 385 ntBASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 AL136317.3-201ENST00000618497 906 ntBASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC144BQ3MJ40 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 AC093214.1-201ENST00000511688 1107 ntBASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 RNA5SP421-201ENST00000516864 134 ntBASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 AL512356.2-201ENST00000546955 174 ntBASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 AC005412.3-201ENST00000580309 715 ntBASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 AL161645.1-201ENST00000622716 1255 ntBASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC144BQ3MJ40 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms