Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CTC1Q2NKJ3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 DGCR5-201ENST00000399539 862 ntBASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 MIR1909-201ENST00000411312 80 ntBASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 ACA64.2-201ENST00000459014 129 ntBASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 AC106886.1-201ENST00000568660 600 ntBASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 AL606495.2-201ENST00000605867 535 ntBASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 AC004840.1-201ENST00000636359 365 ntBASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTC1Q2NKJ3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 AC090340.1-201ENST00000620778 4980 ntBASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 TOP3BP1-201ENST00000420768 1380 ntBASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 AL391005.1-201ENST00000623953 2435 ntBASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTC1Q2NKJ3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 DOC2GP-204ENST00000639052 2548 ntBASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 AL512384.1-201ENST00000406683 331 ntBASIC17.59■□□□□ 0.41
CTC1Q2NKJ3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms