Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DSC1Q08554 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DSC1Q08554 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DSC1Q08554 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.4■□□□□ 0.38
DSC1Q08554 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
DSC1Q08554 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DSC1Q08554 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DSC1Q08554 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DSC1Q08554 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DSC1Q08554 DFFBP1-201ENST00000433250 979 ntBASIC17.4■□□□□ 0.38
DSC1Q08554 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.4■□□□□ 0.38
DSC1Q08554 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.4■□□□□ 0.38
DSC1Q08554 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.4■□□□□ 0.38
DSC1Q08554 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.4■□□□□ 0.38
DSC1Q08554 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DSC1Q08554 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.4■□□□□ 0.38
DSC1Q08554 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.4■□□□□ 0.38
DSC1Q08554 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.4■□□□□ 0.38
DSC1Q08554 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.4■□□□□ 0.38
DSC1Q08554 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DSC1Q08554 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DSC1Q08554 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.4■□□□□ 0.38
DSC1Q08554 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DSC1Q08554 AC005332.8-201ENST00000622750 2735 ntBASIC17.4■□□□□ 0.38
DSC1Q08554 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DSC1Q08554 AC106820.2-201ENST00000563775 3264 ntBASIC17.39■□□□□ 0.38
DSC1Q08554 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
DSC1Q08554 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.39■□□□□ 0.38
DSC1Q08554 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DSC1Q08554 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.37
DSC1Q08554 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DSC1Q08554 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DSC1Q08554 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.39■□□□□ 0.37
DSC1Q08554 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DSC1Q08554 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.39■□□□□ 0.37
DSC1Q08554 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.39■□□□□ 0.37
DSC1Q08554 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
DSC1Q08554 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DSC1Q08554 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DSC1Q08554 SDHAP3-202ENST00000515467 728 ntBASIC17.39■□□□□ 0.37
DSC1Q08554 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.39■□□□□ 0.37
DSC1Q08554 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.39■□□□□ 0.37
DSC1Q08554 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DSC1Q08554 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.39■□□□□ 0.37
DSC1Q08554 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
DSC1Q08554 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.39■□□□□ 0.37
DSC1Q08554 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.39■□□□□ 0.37
DSC1Q08554 AC140912.1-201ENST00000577171 1054 ntBASIC17.39■□□□□ 0.37
DSC1Q08554 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
DSC1Q08554 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
DSC1Q08554 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DSC1Q08554 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
DSC1Q08554 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.39■□□□□ 0.37
DSC1Q08554 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.39■□□□□ 0.37
DSC1Q08554 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.39■□□□□ 0.37
DSC1Q08554 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
DSC1Q08554 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DSC1Q08554 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
DSC1Q08554 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
DSC1Q08554 FZD10-202ENST00000539839 3282 ntBASIC17.39■□□□□ 0.37
DSC1Q08554 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
DSC1Q08554 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.39■□□□□ 0.37
DSC1Q08554 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
DSC1Q08554 AL136982.4-201ENST00000437689 1740 ntBASIC17.38■□□□□ 0.37
DSC1Q08554 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.38■□□□□ 0.37
DSC1Q08554 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.38■□□□□ 0.37
DSC1Q08554 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DSC1Q08554 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DSC1Q08554 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.38■□□□□ 0.37
DSC1Q08554 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
DSC1Q08554 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.38■□□□□ 0.37
DSC1Q08554 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
DSC1Q08554 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.38■□□□□ 0.37
DSC1Q08554 DOC2GP-202ENST00000514950 1163 ntBASIC17.38■□□□□ 0.37
DSC1Q08554 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.38■□□□□ 0.37
DSC1Q08554 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.38■□□□□ 0.37
DSC1Q08554 MIR6069-201ENST00000620069 79 ntBASIC17.38■□□□□ 0.37
DSC1Q08554 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
DSC1Q08554 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DSC1Q08554 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.38■□□□□ 0.37
DSC1Q08554 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DSC1Q08554 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
DSC1Q08554 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
DSC1Q08554 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.38■□□□□ 0.37
DSC1Q08554 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.38■□□□□ 0.37
DSC1Q08554 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.38■□□□□ 0.37
DSC1Q08554 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.38■□□□□ 0.37
DSC1Q08554 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DSC1Q08554 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.37■□□□□ 0.37
DSC1Q08554 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.37■□□□□ 0.37
DSC1Q08554 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DSC1Q08554 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DSC1Q08554 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DSC1Q08554 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DSC1Q08554 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DSC1Q08554 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
DSC1Q08554 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DSC1Q08554 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DSC1Q08554 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.37■□□□□ 0.37
DSC1Q08554 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms