Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDH1Q08174 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDH1Q08174 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDH1Q08174 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDH1Q08174 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCDH1Q08174 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDH1Q08174 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDH1Q08174 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PCDH1Q08174 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDH1Q08174 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH1Q08174 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH1Q08174 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 AC005052.1-201ENST00000625181 2492 ntBASIC15.94■□□□□ 0.14
PCDH1Q08174 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH1Q08174 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH1Q08174 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDH1Q08174 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH1Q08174 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.94■□□□□ 0.14
PCDH1Q08174 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
PCDH1Q08174 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH1Q08174 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDH1Q08174 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH1Q08174 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH1Q08174 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH1Q08174 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDH1Q08174 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.94■□□□□ 0.14
PCDH1Q08174 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH1Q08174 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.94■□□□□ 0.14
PCDH1Q08174 AC064836.3-201ENST00000607928 673 ntBASIC15.94■□□□□ 0.14
PCDH1Q08174 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH1Q08174 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH1Q08174 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH1Q08174 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH1Q08174 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH1Q08174 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
PCDH1Q08174 PCDH8P1-201ENST00000428983 2773 ntBASIC15.94■□□□□ 0.14
PCDH1Q08174 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDH1Q08174 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDH1Q08174 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PCDH1Q08174 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDH1Q08174 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
PCDH1Q08174 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDH1Q08174 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH1Q08174 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH1Q08174 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDH1Q08174 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH1Q08174 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH1Q08174 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH1Q08174 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDH1Q08174 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH1Q08174 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH1Q08174 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDH1Q08174 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDH1Q08174 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH1Q08174 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH1Q08174 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH1Q08174 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH1Q08174 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH1Q08174 KRT18P2-201ENST00000447938 1258 ntBASIC15.93■□□□□ 0.14
PCDH1Q08174 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDH1Q08174 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDH1Q08174 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDH1Q08174 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDH1Q08174 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.93■□□□□ 0.14
PCDH1Q08174 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.93■□□□□ 0.14
PCDH1Q08174 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDH1Q08174 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms