Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC21.76■■□□□ 1.07
COL16A1Q07092 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL16A1Q07092 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL16A1Q07092 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
COL16A1Q07092 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL16A1Q07092 TEX30-203ENST00000376022 828 ntTSL 2 BASIC21.76■■□□□ 1.07
COL16A1Q07092 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL16A1Q07092 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC21.76■■□□□ 1.07
COL16A1Q07092 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC21.76■■□□□ 1.07
COL16A1Q07092 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC21.76■■□□□ 1.07
COL16A1Q07092 PAM16-215ENST00000577031 548 ntTSL 4 BASIC21.76■■□□□ 1.07
COL16A1Q07092 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
COL16A1Q07092 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL16A1Q07092 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL16A1Q07092 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
COL16A1Q07092 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC21.76■■□□□ 1.07
COL16A1Q07092 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL16A1Q07092 REXO1L8P-201ENST00000604378 1897 ntBASIC21.75■■□□□ 1.07
COL16A1Q07092 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC21.75■■□□□ 1.07
COL16A1Q07092 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL16A1Q07092 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL16A1Q07092 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC21.75■■□□□ 1.07
COL16A1Q07092 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL16A1Q07092 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL16A1Q07092 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL16A1Q07092 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL16A1Q07092 CYP46A4P-201ENST00000414953 267 ntBASIC21.75■■□□□ 1.07
COL16A1Q07092 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC21.75■■□□□ 1.07
COL16A1Q07092 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC21.75■■□□□ 1.07
COL16A1Q07092 MAGEA5-201ENST00000446757 942 ntBASIC21.75■■□□□ 1.07
COL16A1Q07092 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC21.75■■□□□ 1.07
COL16A1Q07092 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC21.75■■□□□ 1.07
COL16A1Q07092 MIR4750-201ENST00000584564 56 ntBASIC21.75■■□□□ 1.07
COL16A1Q07092 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC21.75■■□□□ 1.07
COL16A1Q07092 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL16A1Q07092 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC21.75■■□□□ 1.07
COL16A1Q07092 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL16A1Q07092 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL16A1Q07092 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL16A1Q07092 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC21.74■■□□□ 1.07
COL16A1Q07092 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL16A1Q07092 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COL16A1Q07092 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC21.74■■□□□ 1.07
COL16A1Q07092 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL16A1Q07092 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL16A1Q07092 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL16A1Q07092 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL16A1Q07092 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL16A1Q07092 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC21.74■■□□□ 1.07
COL16A1Q07092 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COL16A1Q07092 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
COL16A1Q07092 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL16A1Q07092 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC21.74■■□□□ 1.07
COL16A1Q07092 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL16A1Q07092 AP000346.4-201ENST00000614827 381 ntBASIC21.74■■□□□ 1.07
COL16A1Q07092 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.74■■□□□ 1.07
COL16A1Q07092 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
COL16A1Q07092 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COL16A1Q07092 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL16A1Q07092 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC21.74■■□□□ 1.07
COL16A1Q07092 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL16A1Q07092 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL16A1Q07092 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL16A1Q07092 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL16A1Q07092 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL16A1Q07092 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
COL16A1Q07092 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC21.73■■□□□ 1.07
COL16A1Q07092 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC21.73■■□□□ 1.07
COL16A1Q07092 SPTLC1P5-201ENST00000450718 252 ntBASIC21.73■■□□□ 1.07
COL16A1Q07092 PRKXP1-201ENST00000561423 1122 ntBASIC21.73■■□□□ 1.07
COL16A1Q07092 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC21.73■■□□□ 1.07
COL16A1Q07092 NAT9-222ENST00000583476 583 ntTSL 3 BASIC21.73■■□□□ 1.07
COL16A1Q07092 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC21.73■■□□□ 1.07
COL16A1Q07092 AC138649.2-201ENST00000615886 705 ntBASIC21.73■■□□□ 1.07
COL16A1Q07092 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL16A1Q07092 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.73■■□□□ 1.07
COL16A1Q07092 ABALON-201ENST00000629058 1903 ntBASIC21.73■■□□□ 1.07
COL16A1Q07092 GPAA1P2-202ENST00000606848 1787 ntBASIC21.73■■□□□ 1.07
COL16A1Q07092 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL16A1Q07092 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL16A1Q07092 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL16A1Q07092 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
COL16A1Q07092 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC21.73■■□□□ 1.07
COL16A1Q07092 AC007274.2-201ENST00000421675 662 ntBASIC21.73■■□□□ 1.07
COL16A1Q07092 AC069218.1-201ENST00000435269 762 ntBASIC21.73■■□□□ 1.07
COL16A1Q07092 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL16A1Q07092 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL16A1Q07092 IQSEC3P1-201ENST00000538799 536 ntBASIC21.73■■□□□ 1.07
COL16A1Q07092 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC21.73■■□□□ 1.07
COL16A1Q07092 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC21.73■■□□□ 1.07
COL16A1Q07092 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC21.73■■□□□ 1.07
COL16A1Q07092 NKG7-204ENST00000595217 816 ntTSL 2 BASIC21.73■■□□□ 1.07
COL16A1Q07092 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL16A1Q07092 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC21.73■■□□□ 1.07
COL16A1Q07092 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL16A1Q07092 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL16A1Q07092 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL16A1Q07092 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC21.72■■□□□ 1.07
COL16A1Q07092 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL16A1Q07092 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms